Transcript: ENSDART00000163058.2 NUDT5-204

Description

nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]

Location

Chromosome 4: 7,870,665-7,875,944 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 56 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078073.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162276.2	NUDT5-202	888	217aa	ENSDARP00000138693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQ66	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109252.4	NUDT5-206	1396	217aa	ENSDARP00000099881.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQ66	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163058.2	NUDT5-204	1132	181aa	ENSDARP00000131400.1	Nonsense mediated decay	-	-
ENSDART00000160915.2	NUDT5-205	802	110aa	ENSDARP00000138956.1	Nonsense mediated decay	-	-
ENSDART00000167943.2	NUDT5-203	776	142aa	ENSDARP00000133888.1	Nonsense mediated decay	-	-
ENSDART00000165270.2	NUDT5-201	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,132 bps, Translation length: 181 residues

Version

ENSDART00000163058.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000163058.2 NUDT5-204

Summary

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Transcript: ENSDART00000163058.2 NUDT5-204

Summary

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