Transcript: ENSDART00000162980.2 BX942846.1-201

Location

Chromosome 6: 45,114,674-45,328,699 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 28 domains and features, is associated with 3503 variant alleles and maps to 59 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104277.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162980.2	BX942846.1-201	1497	409aa	ENSDARP00000131359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KGC4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000190061.1	BX942846.1-202	2430	371aa	ENSDARP00000149465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8G1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000159176.2	BX942846.1-203	1216	346aa	ENSDARP00000139141.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2L321	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,497 bps, Translation length: 409 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000162980.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000162980.2 BX942846.1-201

Summary

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Transcript: ENSDART00000162980.2 BX942846.1-201

Summary

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