Transcript: ENSDART00000162928.1 EED-202

Description

embryonic ectoderm development [Source:ZFIN;Acc:ZDB-GENE-050417-287]

Location

About this transcript

This transcript has 12 exons, is annotated with 20 domains and features, is associated with 129 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162928.1	EED-202	1561	443aa	ENSDARP00000131820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q566T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000166052.1	EED-204	827	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000161955.1	EED-201	446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000163891.1	EED-203	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,561 bps, Translation length: 443 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q566T0

Version

ENSDART00000162928.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.