Transcript: ENSDART00000162848.2 lztfl1-204

Description

leucine zipper transcription factor-like 1 [Source:NCBI gene (formerly Entrezgene);Acc:322226]

Location

About this transcript

This transcript has 5 exons, is associated with 87 variant alleles and maps to 71 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000168248.2	lztfl1-205	1822	298aa	ENSDARP00000139253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158562.2	lztfl1-202	1045	261aa	ENSDARP00000138393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000159029.2	lztfl1-203	960	247aa	ENSDARP00000140403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000157576.2	lztfl1-201	651	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000162848.2	lztfl1-204	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 562 bps,

Version

ENSDART00000162848.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.