Transcript: ENSDART00000162777.2 CSNK1G1-202

Description

casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]

Location

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 2354 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162777.2	CSNK1G1-202	1654	421aa	ENSDARP00000138782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PRD4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000188268.1	CSNK1G1-205	6676	485aa	ENSDARP00000146967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165875.3	CSNK1G1-204	6595	458aa	ENSDARP00000140298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IUQ5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157420.2	CSNK1G1-203	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000162177.2	CSNK1G1-201	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,654 bps, Translation length: 421 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5PRD4

Version

ENSDART00000162777.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.