Transcript: ENSDART00000162719.2 POLR2B-203

Description

RNA polymerase II subunit B [Source:ZFIN;Acc:ZDB-GENE-041008-1]

Location

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 536 variant alleles and maps to 189 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160293.2	POLR2B-202	1345	366aa	ENSDARP00000137138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000167045.3	POLR2B-205	6508	1174aa	ENSDARP00000142035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N6S0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162719.2	POLR2B-203	1764	562aa	ENSDARP00000137902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167276.2	POLR2B-204	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157647.2	POLR2B-201	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,764 bps, Translation length: 562 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000162719.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.