Transcript: ENSDART00000162709.3 ndst2a-202

Description

N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]

Gene Synonyms

im:7163473

Location

About this transcript

This transcript has 17 exons, is associated with 4389 variant alleles and maps to 236 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000182440.1	ndst2a-203	3291	758aa	ENSDARP00000149910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRK0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125149.3	ndst2a-201	3218	758aa	ENSDARP00000110811.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRK0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162709.3	ndst2a-202	4761	888aa	ENSDARP00000134140.2	Pseudogene owing to a SNP/indel but in other individuals/haplotypes/strains the gene is translated.Polymorphic pseudogene	-	-

Summary

Statistics

Exons: 17, Coding exons: 13, Transcript length: 4,761 bps, Translation length: 888 residues

Version

ENSDART00000162709.3

Type

Polymorphic pseudogene

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]