Transcript: ENSDART00000162454.2 si:ch211-215k15.4-203

Description

si:ch211-215k15.4 [Source:ZFIN;Acc:ZDB-GENE-131127-215]

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 243 variant alleles and maps to 100 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162454.2	si:ch211-215k15.4-203	1221	319aa	ENSDARP00000139395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000058699.7	si:ch211-215k15.4-201	1216	314aa	ENSDARP00000134815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000153484.3	si:ch211-215k15.4-202	880	52aa	ENSDARP00000132506.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,221 bps, Translation length: 319 residues

Version

ENSDART00000162454.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.