Transcript: ENSDART00000162371.2 si:ch211-154o6.3-203

Description

si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]

Location

Chromosome 16: 21,698,984-21,719,111 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 363 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099846.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000162371.2	si:ch211-154o6.3-203	1196	316aa	ENSDARP00000141972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000181036.1	si:ch211-154o6.3-207	5910	521aa	ENSDARP00000145171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172504.2	si:ch211-154o6.3-206	736	168aa	ENSDARP00000136198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000157752.2	si:ch211-154o6.3-201	702	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000165281.2	si:ch211-154o6.3-204	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000160346.2	si:ch211-154o6.3-202	693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000167764.2	si:ch211-154o6.3-205	617	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,196 bps, Translation length: 316 residues

Version

ENSDART00000162371.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000162371.2 si:ch211-154o6.3-203

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Transcript: ENSDART00000162371.2 si:ch211-154o6.3-203

Summary

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