Transcript: ENSDART00000162289.2 si:ch211-251f6.7-202

Description

si:ch211-251f6.7 [Source:ZFIN;Acc:ZDB-GENE-091113-57]

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 125 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142714.3	si:ch211-251f6.7-201	941	266aa	ENSDARP00000113985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000162289.2	si:ch211-251f6.7-202	1690	261aa	ENSDARP00000131110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QID9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,690 bps, Translation length: 261 residues

Version

ENSDART00000162289.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.