Transcript: ENSDART00000162271.2 ttc21b-202

Description

tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]

Gene Synonyms

sb:cb947

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 25 variant alleles and maps to 86 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000044270.11	ttc21b-201	4300	1321aa	ENSDARP00000044269.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0W1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162271.2	ttc21b-202	564	188aa	ENSDARP00000132606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJ68	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 564 bps, Translation length: 188 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000162271.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.