Transcript: ENSDART00000161676.2 btr25-202

Description

bloodthirsty-related family, member 25 [Source:ZFIN;Acc:ZDB-GENE-070705-377]

Gene Synonyms

si:dkey-218f9.5

Location

Chromosome 19: 4,059,200-4,064,687 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 284 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102018.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172424.2	btr25-205	2059	557aa	ENSDARP00000130844.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JSZ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000161804.2	btr25-203	2051	554aa	ENSDARP00000135544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB12YWA5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000158309.2	btr25-201	1685	530aa	ENSDARP00000137909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000166773.2	btr25-204	807	269aa	ENSDARP00000135921.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000161676.2	btr25-202	801	185aa	ENSDARP00000141539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 801 bps, Translation length: 185 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000161676.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000161676.2 btr25-202

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Transcript: ENSDART00000161676.2 btr25-202

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