Transcript: ENSDART00000161672.2 mhc1lca-201

Description

major histocompatibility complex class I LCA [Source:ZFIN;Acc:ZDB-GENE-140820-4]

Gene Synonyms

sb:eu2458, si:dkey-225f5.5

Location

About this transcript

This transcript has 7 exons, is annotated with 22 domains and features, is associated with 56 variant alleles and maps to 134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161672.2	mhc1lca-201	1663	350aa	ENSDARP00000141825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,663 bps, Translation length: 350 residues

Version

ENSDART00000161672.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]