Transcript: ENSDART00000161666.2 rp9-201

Description

RP9 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]

Gene Synonyms

im:7137386, zgc:103448

Location

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 245 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000161666.2	rp9-201	1138	222aa	ENSDARP00000135134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163618.2	rp9-202	579	192aa	ENSDARP00000134922.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000164619.2	rp9-203	692	53aa	ENSDARP00000137594.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,138 bps, Translation length: 222 residues

Version

ENSDART00000161666.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.