Transcript: ENSDART00000161573.2 APBB2-204

Description

amyloid beta (A4) precursor protein-binding, family B, member 2b [Source:ZFIN;Acc:ZDB-GENE-090313-73]

Location

Chromosome 1: 19,933,065-19,989,062 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 35 domains and features, is associated with 1019 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099995.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000158344.2	APBB2-201	3326	863aa	ENSDARP00000135063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000161573.2	APBB2-204	2097	698aa	ENSDARP00000139598.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000164661.2	APBB2-202	479	138aa	ENSDARP00000136018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000170396.2	APBB2-203	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,097 bps, Translation length: 698 residues

Version

ENSDART00000161573.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000161573.2 APBB2-204

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Transcript: ENSDART00000161573.2 APBB2-204

Summary

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