Transcript: ENSDART00000161532.3 zfyve9b-201

Description

zinc finger, FYVE domain containing 9b [Source:ZFIN;Acc:ZDB-GENE-110825-2]

Location

Chromosome 11: 13,058,613-13,088,171 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features, is associated with 401 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100764.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000161532.3	zfyve9b-201	2538	788aa	ENSDARP00000139522.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000186126.1	zfyve9b-203	2183	409aa	ENSDARP00000156872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000162259.2	zfyve9b-202	1239	412aa	ENSDARP00000134578.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,538 bps, Translation length: 788 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000161532.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000161532.3 zfyve9b-201

Summary

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Transcript: ENSDART00000161532.3 zfyve9b-201

Summary

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