Transcript: ENSDART00000161486.2 ST3GAL5-205

Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]

Location

Chromosome 14: 9,485,070-9,499,474 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 581 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037556.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054690.7	ST3GAL5-203	2312	364aa	ENSDARP00000054689.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161486.2	ST3GAL5-205	2418	364aa	ENSDARP00000133508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCA6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135449.3	ST3GAL5-204	944	41aa	ENSDARP00000118337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137274.2	ST3GAL5-202	605	183aa	ENSDARP00000119698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147923.2	ST3GAL5-201	4054	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,418 bps, Translation length: 364 residues

Version

ENSDART00000161486.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000161486.2 ST3GAL5-205

Summary

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Transcript: ENSDART00000161486.2 ST3GAL5-205

Summary

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