Transcript: ENSDART00000161483.2 hip1rb-202

Description

huntingtin interacting protein 1 related b [Source:ZFIN;Acc:ZDB-GENE-070209-59]

Gene Synonyms

zgc:158784

Location

About this transcript

This transcript has 25 exons, is annotated with 28 domains and features, is associated with 733 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160189.2	hip1rb-201	3482	1065aa	ENSDARP00000134811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161483.2	hip1rb-202	2749	916aa	ENSDARP00000140228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ITB0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000164118.2	hip1rb-203	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 2,749 bps, Translation length: 916 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000161483.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.