Transcript: ENSDART00000161312.2 ogt.1-203

Description

O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]

Gene Synonyms

copy I, fm81g08, ogt, ogta, wu:fc12b01, wu:fm81g08

Location

Chromosome 14: 14,702,110-14,705,539 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2 variant alleles and maps to 118 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099455.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168092.2	ogt.1-204	3890	1102aa	ENSDARP00000138724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IVJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000159456.2	ogt.1-202	3141	1046aa	ENSDARP00000130346.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IBY4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000157392.2	ogt.1-201	3111	1036aa	ENSDARP00000136590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMD1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000170269.2	ogt.1-205	897	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000161312.2	ogt.1-203	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 761 bps,

Version

ENSDART00000161312.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000161312.2 ogt.1-203

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Transcript: ENSDART00000161312.2 ogt.1-203

Summary

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