Transcript: ENSDART00000161071.2 si:ch73-361p23.3-202

Description

si:ch73-361p23.3 [Source:ZFIN;Acc:ZDB-GENE-130530-906]

Location

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 95 variant alleles and maps to 83 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000124623.3	si:ch73-361p23.3-201	1714	272aa	ENSDARP00000107215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5J4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161071.2	si:ch73-361p23.3-202	537	179aa	ENSDARP00000138064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 537 bps, Translation length: 179 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000161071.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.