Transcript: ENSDART00000160911.3 erc2-202

Description

ELKS/RAB6-interacting/CAST family member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-700]

Gene Synonyms

zmp:0000000697

Location

About this transcript

This transcript has 14 exons, is annotated with 36 domains and features, is associated with 2718 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166468.2	erc2-203	2952	983aa	ENSDARP00000136620.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IL25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160911.3	erc2-202	2931	918aa	ENSDARP00000133777.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGY4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159184.2	erc2-201	2145	714aa	ENSDARP00000134123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFV4	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 2,931 bps, Translation length: 918 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000160911.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]