Transcript: ENSDART00000160894.2 BRD2-204

Description

bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]

Location

Chromosome 19: 7,154,533-7,169,750 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 44 domains and features, is associated with 608 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000022280.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035967.8	BRD2-202	4000	836aa	ENSDARP00000038787.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8CYR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000160894.2	BRD2-204	3031	832aa	ENSDARP00000139243.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWX7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000080348.7	BRD2-201	593	137aa	ENSDARP00000125986.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152077.2	BRD2-203	1199	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000139402.2	BRD2-205	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,031 bps, Translation length: 832 residues

Version

ENSDART00000160894.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000160894.2 BRD2-204

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Transcript: ENSDART00000160894.2 BRD2-204

Summary

About Us

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