Transcript: ENSDART00000160800.2 phka1b-201

Description

phosphorylase kinase, alpha 1b (muscle) [Source:ZFIN;Acc:ZDB-GENE-091204-81]

Location

Chromosome 21: 30,606,572-30,648,106 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 4 domains and features, is associated with 1196 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000105039.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177022.2	phka1b-206	3644	1181aa	ENSDARP00000144612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YBM7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160800.2	phka1b-201	3251	1046aa	ENSDARP00000140401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160870.2	phka1b-202	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000165419.2	phka1b-204	222	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000161715.2	phka1b-203	766	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000171858.2	phka1b-205	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 3,251 bps, Translation length: 1,046 residues

Version

ENSDART00000160800.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

3' standard supported extension [Definitions]

Transcript: ENSDART00000160800.2 phka1b-201

Summary

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Transcript: ENSDART00000160800.2 phka1b-201

Summary

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