Transcript: ENSDART00000160791.2 FN1-202

Description

fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]

Location

Chromosome 1: 5,504,128-5,542,565 reverse strand.

About this transcript

This transcript has 45 exons, is annotated with 180 domains and features, is associated with 704 variant alleles and maps to 288 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000006526.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103755.4	FN1-205	8522	2500aa	ENSDARP00000094530.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2CEW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160791.2	FN1-202	8191	2419aa	ENSDARP00000131015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000103754.6	FN1-201	1212	287aa	ENSDARP00000141528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000126172.3	FN1-203	959	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144185.2	FN1-204	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 45, Coding exons: 45, Transcript length: 8,191 bps, Translation length: 2,419 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000160791.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000160791.2 FN1-202

Summary

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Transcript: ENSDART00000160791.2 FN1-202

Summary

About Us

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