Transcript: ENSDART00000160752.2 PDE6B-202

Description

phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]

Location

About this transcript

This transcript has 3 exons and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000000392.10	PDE6B-201	3033	858aa	ENSDARP00000000392.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q800E7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189157.1	PDE6B-203	3467	842aa	ENSDARP00000156300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160752.2	PDE6B-202	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 733 bps,

Version

ENSDART00000160752.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.