Transcript: ENSDART00000160624.2 RPS18-203

Description

ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]

Location

Chromosome 19: 18,617,757-18,626,515 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 31 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100392.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167971.2	RPS18-205	683	152aa	ENSDARP00000133054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQW5 Q8JGS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168004.2	RPS18-206	786	82aa	ENSDARP00000141432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000162034.2	RPS18-204	572	82aa	ENSDARP00000130813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165486.2	RPS18-201	464	101aa	ENSDARP00000135459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160624.2	RPS18-203	295	89aa	ENSDARP00000136169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000167704.2	RPS18-202	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 295 bps, Translation length: 89 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000160624.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000160624.2 RPS18-203

Summary

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Transcript: ENSDART00000160624.2 RPS18-203

Summary

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