Transcript: ENSDART00000160489.2 col14a1b-201

Description

collagen, type XIV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1985]

Gene Synonyms

si:zfos-632h11.7, wu:fb93g03

Location

About this transcript

This transcript has 18 exons, is annotated with 57 domains and features, is associated with 103 variant alleles and maps to 26 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160489.2	col14a1b-201	2329	776aa	ENSDARP00000136988.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IP59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000168334.2	col14a1b-203	1360	322aa	ENSDARP00000137685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IS09	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000162379.2	col14a1b-202	939	181aa	ENSDARP00000132600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IEC5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,329 bps, Translation length: 776 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000160489.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.