Transcript: ENSDART00000160473.2 RPL13-203

Description

ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]

Location

Chromosome 7: 67,468,986-67,473,597 forward strand.

About this transcript

This transcript has 3 exons, is associated with 304 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099380.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168460.2	RPL13-201	1383	211aa	ENSDARP00000132139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176368.2	RPL13-204	1695	211aa	ENSDARP00000144370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90Z10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170322.2	RPL13-202	658	158aa	ENSDARP00000140661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000160473.2	RPL13-203	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 581 bps,

Version

ENSDART00000160473.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000160473.2 RPL13-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000160473.2 RPL13-203

Summary

About Us

Get help

Our sister sites

Follow us