Transcript: ENSDART00000160440.2 cacna1hb-201

Description

calcium channel, voltage-dependent, T type, alpha 1H subunit b [Source:ZFIN;Acc:ZDB-GENE-090312-128]

Gene Synonyms

si:ch211-201p7.4, si:ch211-22n13.1

Location

About this transcript

This transcript has 27 exons, is annotated with 67 domains and features, is associated with 2371 variant alleles and maps to 232 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160440.2	cacna1hb-201	5045	1681aa	ENSDARP00000137239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000168631.2	cacna1hb-202	4788	1595aa	ENSDARP00000130716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDH2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 5,045 bps, Translation length: 1,681 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000160440.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.