Transcript: ENSDART00000160156.2 sec23a-201

Description

Sec23 homolog A, coat complex II component [Source:ZFIN;Acc:ZDB-GENE-040426-2823]

Location

Chromosome 17: 10,090,638-10,145,432 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 22 domains and features, is associated with 897 variant alleles and maps to 250 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000104230.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160156.2	sec23a-201	5564	765aa	ENSDARP00000137308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSV7 Q7SZE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169522.2	sec23a-203	3150	765aa	ENSDARP00000134628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSV7 Q7SZE5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168055.2	sec23a-202	2304	765aa	ENSDARP00000139718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GSV7 Q7SZE5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 5,564 bps, Translation length: 765 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7SZE5

Version

ENSDART00000160156.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000160156.2 sec23a-201

Summary

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Transcript: ENSDART00000160156.2 sec23a-201

Summary

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