Transcript: ENSDART00000160003.2 spcs3-201

Description

signal peptidase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2206]

Gene Synonyms

zgc:85675

Location

About this transcript

This transcript has 5 exons, is associated with 6 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166864.2	spcs3-203	761	180aa	ENSDARP00000139098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NWJ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160003.2	spcs3-201	711	77aa	ENSDARP00000132251.1	Nonsense mediated decay	A0A0R4IDS7	-
ENSDART00000165405.2	spcs3-202	456	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 711 bps, Translation length: 77 residues

Version

ENSDART00000160003.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.