Transcript: ENSDART00000160000.2 SPDL1-201

Description

spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]

Location

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 598 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000160000.2	SPDL1-201	2049	590aa	ENSDARP00000132249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186088.1	SPDL1-204	4228	625aa	ENSDARP00000153982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000187633.1	SPDL1-203	3667	631aa	ENSDARP00000151487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000183629.1	SPDL1-202	3529	632aa	ENSDARP00000154941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,049 bps, Translation length: 590 residues

Version

ENSDART00000160000.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.