Transcript: ENSDART00000159905.2 si:ch211-175m2.4-202

Description

si:ch211-175m2.4 [Source:ZFIN;Acc:ZDB-GENE-141222-24]

Location

About this transcript

This transcript has 9 exons, is annotated with 17 domains and features, is associated with 512 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159905.2	si:ch211-175m2.4-202	993	234aa	ENSDARP00000139116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158812.2	si:ch211-175m2.4-201	779	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000160576.2	si:ch211-175m2.4-203	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 993 bps, Translation length: 234 residues

Version

ENSDART00000159905.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]