Transcript: ENSDART00000159904.2 ep400-201

Description

E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]

Gene Synonyms

si:ch211-227i14.2

Location

Chromosome 8: 43,671,200-43,689,324 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 30 domains and features, is associated with 753 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000100965.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166581.2	ep400-204	9126	3041aa	ENSDARP00000133618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TWH5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171633.2	ep400-206	4849	1616aa	ENSDARP00000134655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159904.2	ep400-201	3254	1085aa	ENSDARP00000132432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000167762.2	ep400-205	775	258aa	ENSDARP00000137420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000163237.2	ep400-203	550	183aa	ENSDARP00000131897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000162674.2	ep400-202	286	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,254 bps, Translation length: 1,085 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000159904.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000159904.2 ep400-201

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Transcript: ENSDART00000159904.2 ep400-201

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