Transcript: ENSDART00000159889.2 CCNE2-202

Description

cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]

Location

Chromosome 16: 40,580,500-40,583,150 forward strand.

About this transcript

This transcript has 5 exons, is associated with 270 variant alleles and maps to 48 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000098529.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169412.2	CCNE2-201	2123	392aa	ENSDARP00000141058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PD24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193464.1	CCNE2-205	4602	388aa	ENSDARP00000151947.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000161503.2	CCNE2-204	2125	392aa	ENSDARP00000133949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PD24	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163202.2	CCNE2-203	1970	50aa	ENSDARP00000141502.1	Nonsense mediated decay	-	-
ENSDART00000159889.2	CCNE2-202	667	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 667 bps,

Version

ENSDART00000159889.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000159889.2 CCNE2-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000159889.2 CCNE2-202

Summary

About Us

Get help

Our sister sites

Follow us