Transcript: ENSDART00000159850.2 MRPS22-202

Description

mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]

Gene Synonyms

zgc:165596

Location

About this transcript

This transcript has 4 exons, is associated with 649 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000027657.8	MRPS22-204	1248	340aa	ENSDARP00000027370.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165487.2	MRPS22-203	370	123aa	ENSDARP00000131370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000167815.2	MRPS22-201	892	61aa	ENSDARP00000133657.1	Nonsense mediated decay	-
ENSDART00000159850.2	MRPS22-202	559	48aa	ENSDARP00000140118.1	Nonsense mediated decay	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 559 bps, Translation length: 48 residues

Version

ENSDART00000159850.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.