Transcript: ENSDART00000159840.2 asic1c-201

Description

acid-sensing (proton-gated) ion channel 1c [Source:ZFIN;Acc:ZDB-GENE-040513-3]

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 263 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169227.2	asic1c-202	1602	529aa	ENSDARP00000130223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q708S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159840.2	asic1c-201	748	249aa	ENSDARP00000136843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 748 bps, Translation length: 249 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000159840.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.