Transcript: ENSDART00000159688.2 fbxo11a-204

Description

F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]

Gene Synonyms

fbxo11, fj83f06, im:6906507, wu:fj83f06, zgc:153171

Location

Chromosome 13: 48,384,982-48,431,766 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 45 domains and features, is associated with 1269 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000102294.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159688.2	fbxo11a-204	2862	844aa	ENSDARP00000134626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IJR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000171765.2	fbxo11a-206	2999	879aa	ENSDARP00000140781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXA1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000190140.1	fbxo11a-208	2577	858aa	ENSDARP00000155828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKG5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000169473.2	fbxo11a-205	1685	233aa	ENSDARP00000134594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IL43	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000172086.2	fbxo11a-207	390	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 2,862 bps, Translation length: 844 residues

Version

ENSDART00000159688.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000159688.2 fbxo11a-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000159688.2 fbxo11a-204

Summary

About Us

Get help

Our sister sites

Follow us