Transcript: ENSDART00000159674.2 tom1l2-203

Description

target of myb1 like 2 membrane trafficking protein [Source:NCBI gene (formerly Entrezgene);Acc:560327]

Location

Chromosome 12: 18,381,985-18,393,408 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 391 variant alleles and maps to 36 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000009217.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152748.3	tom1l2-202	1903	524aa	ENSDARP00000126856.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEE3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000078767.6	tom1l2-201	1515	504aa	ENSDARP00000073228.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F811	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000159674.2	tom1l2-203	684	126aa	ENSDARP00000142002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 684 bps, Translation length: 126 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000159674.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

non-submitted evidence [Definitions]

Transcript: ENSDART00000159674.2 tom1l2-203

Summary

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Transcript: ENSDART00000159674.2 tom1l2-203

Summary

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