Transcript: ENSDART00000159554.2 si:dkey-27d5.7-201

Description

si:dkey-27d5.7 [Source:ZFIN;Acc:ZDB-GENE-141216-27]

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 175 variant alleles and maps to 1079 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184520.1	si:dkey-27d5.7-202	837	278aa	ENSDARP00000155435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159554.2	si:dkey-27d5.7-201	1007	231aa	ENSDARP00000133378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000192041.1	si:dkey-27d5.7-203	525	174aa	ENSDARP00000146599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q6A9	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,007 bps, Translation length: 231 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000159554.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.