Transcript: ENSDART00000159490.2 pax6a-202

Description

paired box 6a [Source:NCBI gene (formerly Entrezgene);Acc:30567]

Location

Chromosome 25: 15,039,699-15,049,781 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 14 variant alleles and maps to 145 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000103379.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000164384.2	pax6a-205	2797	451aa	ENSDARP00000135767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TDJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000162485.2	pax6a-204	2730	437aa	ENSDARP00000139430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P26630-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165774.2	pax6a-207	1922	441aa	ENSDARP00000140503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXU2	-
ENSDART00000161165.2	pax6a-203	1006	74aa	ENSDARP00000133480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000165632.2	pax6a-206	933	96aa	ENSDARP00000130714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000166490.2	pax6a-208	911	114aa	ENSDARP00000138440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159342.2	pax6a-201	876	113aa	ENSDARP00000130972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159490.2	pax6a-202	860	17aa	ENSDARP00000133859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172538.2	pax6a-210	699	138aa	ENSDARP00000138421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000169876.2	pax6a-209	306	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 860 bps, Translation length: 17 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000159490.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000159490.2 pax6a-202

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Transcript: ENSDART00000159490.2 pax6a-202

Summary

About Us

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