Transcript: ENSDART00000159311.2 cc2d1b-201

Description

coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]

Gene Synonyms

fb71c02, si:ch211-57g18.1, wu:fb71c02

Location

Chromosome 2: 19,237,363-19,243,344 forward strand.

About this transcript

This transcript has 2 exons, is associated with 177 variant alleles and maps to 4 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000099445.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166292.2	cc2d1b-203	5996	859aa	ENSDARP00000140305.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168644.3	cc2d1b-204	2971	859aa	ENSDARP00000136202.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILN1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163875.2	cc2d1b-202	2833	859aa	ENSDARP00000137387.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILN1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159311.2	cc2d1b-201	528	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 528 bps,

Version

ENSDART00000159311.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000159311.2 cc2d1b-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000159311.2 cc2d1b-201

Summary

About Us

Get help

Our sister sites

Follow us