Transcript: ENSDART00000159221.2 PLEKHA6-201

Description

pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]

Location

Chromosome 11: 23,403,812-23,479,866 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 1357 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020328.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000169066.2	PLEKHA6-205	3611	1202aa	ENSDARP00000136128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000032844.9	PLEKHA6-202	5462	1088aa	ENSDARP00000033739.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000183935.1	PLEKHA6-203	4520	1176aa	ENSDARP00000146200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000184125.1	PLEKHA6-206	4337	1115aa	ENSDARP00000151810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000193284.1	PLEKHA6-204	4242	1084aa	ENSDARP00000147350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000159221.2	PLEKHA6-201	539	129aa	ENSDARP00000133648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 539 bps, Translation length: 129 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000159221.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000159221.2 PLEKHA6-201

Summary

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Transcript: ENSDART00000159221.2 PLEKHA6-201

Summary

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