Transcript: ENSDART00000158919.2 LPAR1-201

Description

lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]

Location

About this transcript

This transcript has 2 exons, is annotated with 39 domains and features, is associated with 871 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158919.2	LPAR1-201	1427	280aa	ENSDARP00000141253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000180545.1	LPAR1-203	2027	346aa	ENSDARP00000146706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHQ8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172625.2	LPAR1-202	1659	346aa	ENSDARP00000140290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHQ8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,427 bps, Translation length: 280 residues

Version

ENSDART00000158919.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.