Transcript: ENSDART00000158880.2 zgc:113343-202

Description

zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]

Location

About this transcript

This transcript has 3 exons, is annotated with 38 domains and features, is associated with 168 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162725.2	zgc:113343-203	1634	356aa	ENSDARP00000134917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158880.2	zgc:113343-202	778	228aa	ENSDARP00000132396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000157754.2	zgc:113343-201	679	141aa	ENSDARP00000134772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 778 bps, Translation length: 228 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000158880.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.