Transcript: ENSDART00000158846.2 mibp-201

Description

muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]

Location

Chromosome 22: 5,118,406-5,121,460 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101362.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168371.2	mibp-202	1514	201aa	ENSDARP00000137169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170222.2	mibp-204	1021	151aa	ENSDARP00000131756.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000169200.2	mibp-203	741	140aa	ENSDARP00000137417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ISM1	-
ENSDART00000158846.2	mibp-201	500	94aa	ENSDARP00000134826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171113.2	mibp-206	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000170589.2	mibp-205	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 500 bps, Translation length: 94 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000158846.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000158846.2 mibp-201

Summary

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Transcript: ENSDART00000158846.2 mibp-201

Summary

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