Transcript: ENSDART00000158807.2 cbln17-202

Description

cerebellin 17 [Source:ZFIN;Acc:ZDB-GENE-111109-4]

Gene Synonyms

sghC1q17

Location

About this transcript

This transcript has 2 exons, is associated with 302 variant alleles and maps to 10 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126629.3	cbln17-201	972	244aa	ENSDARP00000107429.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F3S5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000158807.2	cbln17-202	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000170169.2	cbln17-203	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 765 bps,

Version

ENSDART00000158807.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.