Transcript: ENSDART00000158577.2 slc25a11-202

Description

solute carrier family 25 member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]

Gene Synonyms

fa07h09, wu:fa07h09, zgc:86898

Location

About this transcript

This transcript has 4 exons, is associated with 436 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051849.4	slc25a11-201	1667	308aa	ENSDARP00000051848.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R319	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158577.2	slc25a11-202	790	60aa	ENSDARP00000130089.1	Nonsense mediated decay	A0A0R4IB39	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 790 bps, Translation length: 60 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000158577.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.