Transcript: ENSDART00000158537.2 smg6-201

Description

SMG6 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:17809]

Location

About this transcript

This transcript has 19 exons, is annotated with 46 domains and features, is associated with 327 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158537.2	smg6-201	5701	1544aa	ENSDARP00000140752.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IZ84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,701 bps, Translation length: 1,544 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0A0R4IZ84

Version

ENSDART00000158537.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.