Transcript: ENSDART00000158321.2 si:dkey-208k4.2-201

Description

si:dkey-208k4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6124]

Gene Synonyms

fi35c12, wu:fi35c12

Location

About this transcript

This transcript has 6 exons, is associated with 40 variant alleles and maps to 189 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000163104.2	si:dkey-208k4.2-202	1475	366aa	ENSDARP00000141494.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IX80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164644.2	si:dkey-208k4.2-203	1195	300aa	ENSDARP00000136957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IN01	-
ENSDART00000167480.2	si:dkey-208k4.2-204	909	257aa	ENSDARP00000133117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDN3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000158321.2	si:dkey-208k4.2-201	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 783 bps,

Version

ENSDART00000158321.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.